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  5. Brara.F03156.1

Brara.F03156.1


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03156.1
Cluster HCAA Clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
169182 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Bradi2g17710 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Bradi2g48610 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Brara.C01848.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D02299.1 No alias subfamily ABCB transporter 0.05 Orthogroups_2024-Update
Brara.F03152.1 No alias subfamily ABCB transporter 0.01 Orthogroups_2024-Update
Brara.K00467.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Glyma.19G016400 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G063020.3 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
LOC_Os01g50160 No alias MDR-like ABC transporter, putative, expressed 0.03 Orthogroups_2024-Update
MA_114017g0010 No alias (q6yuu5|mdr_orysa : 1316.0) Putative multidrug... 0.02 Orthogroups_2024-Update
Mp2g02920.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.01 Orthogroups_2024-Update
PSME_00021941-RA No alias (at2g47000 : 947.0) Multidrug resistance P-glycoprotein... 0.03 Orthogroups_2024-Update
Potri.002G019600 No alias P-glycoprotein 13 0.03 Orthogroups_2024-Update
Potri.002G187500 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Potri.003G094400 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Pp1s29_108V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Sobic.006G014800.1 No alias ABC-B-type transporter *(AMN3) & subfamily ABCB transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1018 1168
IPR003439 ABC_transporter-like 381 526
IPR011527 ABC1_TM_dom 36 303
IPR011527 ABC1_TM_dom 678 946
No external refs found!