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  5. Brara.F03169.1

Brara.F03169.1


Description : Unknown function


Gene families : OG_42_0002433 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03169.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Brara.B03319.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g01770 No alias ZOS1-01 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
PSME_00010180-RA No alias (at5g40310 : 300.0) Exonuclease family protein;... 0.02 Orthogroups_2024-Update
Solyc02g067730 No alias RNA exonuclease-like protein (AHRD V3.3 *** A0A072VJ45_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 151 277
No external refs found!