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At2g21390


Description : Coatomer subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT9]


Gene families : OG_42_0002646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g21390
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_15962 No alias coatomer subunit alpha-1 0.03 Orthogroups_2024-Update
Brara.H01794.1 No alias subunit alpha of coat protein complex 0.04 Orthogroups_2024-Update
Cre13.g565850 No alias Coatomer, alpha subunit 0.01 Orthogroups_2024-Update
Glyma.10G199300 No alias Coatomer, alpha subunit 0.05 Orthogroups_2024-Update
Glyma.20G190900 No alias Coatomer, alpha subunit 0.03 Orthogroups_2024-Update
Kfl00045_0430 kfl00045_0430_v1.1 (at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
LOC_Os03g50350 No alias coatomer alpha subunit, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.02 Orthogroups_2024-Update
PSME_00024193-RA No alias (at1g62020 : 1949.0) Coatomer, alpha subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00051512-RA No alias (at1g62020 : 1810.0) Coatomer, alpha subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
Pp1s135_34V6 No alias coatomer alpha 0.04 Orthogroups_2024-Update
Pp1s86_189V6 No alias coatomer alpha 0.02 Orthogroups_2024-Update
Seita.9G119500.1 No alias subunit alpha of coat protein complex 0.03 Orthogroups_2024-Update
evm.model.tig00000144.152 No alias (at1g62020 : 592.0) Coatomer, alpha subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 45 79
IPR001680 WD40_repeat 84 121
IPR001680 WD40_repeat 126 163
IPR024977 Apc4_WD40_dom 211 291
IPR006692 Coatomer_WD-assoc_reg 341 768
IPR010714 Coatomer_asu_C 815 1218
No external refs found!