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  5. Brara.F03207.1

Brara.F03207.1


Description : pectate lyase & EC_4.2 carbon-oxygen lyase


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03207.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Potri.005G064500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G064700 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Seita.4G230900.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Seita.9G233400.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 146 329
No external refs found!