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  5. Brara.F03218.1

Brara.F03218.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03218.1
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
A4A49_13282 No alias transcription factor gte4 0.04 Orthogroups_2024-Update
Brara.E03635.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G284000 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Sobic.003G238400.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
Sobic.004G205600.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR027353 NET_dom 331 393
IPR001487 Bromodomain 183 263
No external refs found!