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  5. Brara.F03423.1

Brara.F03423.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03423.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
A4A49_13899 No alias f-box protein 0.04 Orthogroups_2024-Update
At1g33920 No alias Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4... 0.05 Orthogroups_2024-Update
At2g02280 No alias Putative protein PHLOEM PROTEIN 2-LIKE B4... 0.04 Orthogroups_2024-Update
At5g45080 No alias Protein PHLOEM PROTEIN 2-LIKE A6... 0.02 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.04 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
Bradi3g54987 No alias phloem protein 2-B12 0.02 Orthogroups_2024-Update
Brara.A01072.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03096.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03422.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G099376 No alias F-box family protein 0.02 Orthogroups_2024-Update
Glyma.03G233800 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
Glyma.07G222500 No alias phloem protein 2-A1 0.02 Orthogroups_2024-Update
HORVU3Hr1G025670.4 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_179528g0010 No alias (at1g09155 : 169.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
MA_6489g0010 No alias (at1g09155 : 168.0) phloem protein 2-B15 (PP2-B15);... 0.02 Orthogroups_2024-Update
PSME_00005738-RA No alias (at2g02240 : 179.0) maternal effect embryo arrest 66... 0.01 Orthogroups_2024-Update
PSME_00052353-RA No alias (at2g02230 : 141.0) phloem protein 2-B1 (PP2-B1);... 0.03 Orthogroups_2024-Update
Potri.013G012600 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Potri.018G016000 No alias phloem protein 2-B2 0.03 Orthogroups_2024-Update
Pp1s106_35V6 No alias T27I15.150; F-box family protein / lectin-related... 0.02 Orthogroups_2024-Update
Seita.6G063500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g053620 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.02 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.04 Orthogroups_2024-Update
Sopen01g043520 No alias Phloem protein 2 0.03 Orthogroups_2024-Update
Sopen12g032710 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 82 261
IPR025886 PP2-like 274 321
No external refs found!