1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At2g21660

At2g21660


Description : Glycine-rich RNA-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q03250]


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g21660
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
140819 No alias glycine-rich RNA-binding protein 4 0.02 Orthogroups_2024-Update
81392 No alias glycine-rich RNA-binding protein 3 0.02 Orthogroups_2024-Update
A4A49_03158 No alias glycine-rich rna-binding protein 4, mitochondrial 0.03 Orthogroups_2024-Update
Brara.D01278.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01810.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I04624.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K01454.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.11G117600 No alias cold, circadian rhythm, and rna binding 2 0.05 Orthogroups_2024-Update
Glyma.12G043000 No alias cold, circadian rhythm, and RNA binding 1 0.03 Orthogroups_2024-Update
Kfl00090_0320 kfl00090_0320_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os04g49440 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g08960 No alias RNA recognition motif containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g36490 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g41120 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31800 No alias glycine-rich RNA-binding protein 7, putative, expressed 0.03 Orthogroups_2024-Update
Mp4g15980.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Orthogroups_2024-Update
Potri.009G116400 No alias cold, circadian rhythm, and RNA binding 1 0.03 Orthogroups_2024-Update
Pp1s136_70V6 No alias glycine-rich rna-binding protein 0.03 Orthogroups_2024-Update
Seita.2G062600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G427300.1 No alias RNA editing factor *(ORRM3) 0.04 Orthogroups_2024-Update
Seita.9G021300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G092500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc10g051390 No alias RNA-binding glycine-rich protein (AHRD V3.3 *** D6PZY6_TOBAC) 0.03 Orthogroups_2024-Update
Sopen01g051850 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen02g016120 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.04 Orthogroups_2024-Update
Sopen02g033510 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen10g023080 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
Sopen10g032720 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update
evm.model.tig00000826.12 No alias (at3g23830 : 98.2) encodes a glycine-rich RNA binding... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004359 glutaminase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!