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  5. Brara.F03603.1

Brara.F03603.1


Description : Unknown function


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03603.1
Cluster HCAA Clusters: Cluster_375

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G077630.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G069620.26 No alias deubiquitinase *(UBP15-21) 0.03 Orthogroups_2024-Update
Kfl00030_0470 kfl00030_0470_v1.1 (at3g14400 : 269.0) Encodes a ubiquitin-specific... 0.02 Orthogroups_2024-Update
Seita.2G235700.1 No alias deubiquitinase *(UBP15-21) 0.02 Orthogroups_2024-Update
Seita.3G183900.1 No alias deubiquitinase *(UBP25) 0.02 Orthogroups_2024-Update
Solyc07g061780 No alias Ubiquitin carboxyl-terminal hydrolase 15-like protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEA 16Dec
BP GO:0016579 protein deubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 167 471
No external refs found!