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  5. Brara.F03679.1

Brara.F03679.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03679.1
Cluster HCAA Clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
A4A49_12162 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
Bradi1g28920 No alias phosphate starvation response 1 0.03 Orthogroups_2024-Update
Brara.E00699.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
GRMZM2G175827 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G095530.2 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
HORVU5Hr1G097900.21 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g45890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g25799 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g12750 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
PSME_00031433-RA No alias (at4g28610 : 112.0) Similar to phosphate starvation... 0.03 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G137600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s2_312V6 No alias dna binding 0.02 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G106300.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 127 173
IPR001005 SANT/Myb 26 76
No external refs found!