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  5. Brara.F03830.1

Brara.F03830.1


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.F03830.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Bradi2g34660 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g46070 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Brara.G03241.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G053909 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G174926 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G158460 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G024190.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU1Hr1G082970.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G061010.9 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.07 Orthogroups_2024-Update
LOC_Os01g47740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g48970 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_112261g0010 No alias (at5g24870 : 171.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.001G304900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.001G373700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G274700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G097100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G005600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Seita.5G113000.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.5G263300.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G226600.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G042100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.006G240400.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G232800.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Solyc08g006460 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.05 Orthogroups_2024-Update
Solyc12g040390 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G73760.1) 0.03 Orthogroups_2024-Update
Sopen04g032280 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 559 600
No external refs found!