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  5. Brara.F03887.1

Brara.F03887.1


Description : Unknown function


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03887.1
Cluster HCAA Clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
At1g23210 No alias Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296] 0.04 Orthogroups_2024-Update
At1g48930 No alias Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995] 0.04 Orthogroups_2024-Update
At1g75680 No alias Endoglucanase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCP6] 0.03 Orthogroups_2024-Update
At4g39010 No alias Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7] 0.03 Orthogroups_2024-Update
Bradi2g11870 No alias glycosyl hydrolase 9B13 0.03 Orthogroups_2024-Update
HORVU5Hr1G098710.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g12070 No alias endoglucanase precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g36610 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.03 Orthogroups_2024-Update
Potri.003G147600 No alias cellulase 2 0.03 Orthogroups_2024-Update
Pp1s149_10V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Pp1s376_19V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.1G339700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G021400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g049300 No alias Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU) 0.03 Orthogroups_2024-Update
Solyc12g055970 No alias Endoglucanase (AHRD V3.3 *** Q93WY9_TOBAC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 24 481
No external refs found!