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  5. Brara.F03890.1

Brara.F03890.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03890.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
111647 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
A4A49_04905 No alias b-box zinc finger protein 19 0.04 Orthogroups_2024-Update
At2g21320 No alias B-box zinc finger protein 18... 0.06 Orthogroups_2024-Update
At4g38960 No alias B-box type zinc finger family protein... 0.07 Orthogroups_2024-Update
Glyma.01G168500 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G081190.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Potri.004G162600 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.009G124400 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Seita.2G284200.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Solyc01g110370 No alias Zinc finger, B-box (AHRD V3.3 *** A0A118K2C5_CYNCS) 0.03 Orthogroups_2024-Update
Solyc02g084420 No alias B-box zinc finger family protein (AHRD V3.3 *** AT2G21320.1) 0.03 Orthogroups_2024-Update
Sopen01g052520 No alias B-box zinc finger 0.04 Orthogroups_2024-Update
Sopen02g029130 No alias B-box zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 42
IPR000315 Znf_B-box 52 91
No external refs found!