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  5. Brara.F03915.1

Brara.F03915.1


Description : alpha-like-class expansin


Gene families : OG_42_0003075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03915.1
Cluster HCAA Clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
PSME_00023640-RA No alias (at4g38400 : 195.0) member of EXPANSIN-LIKE. Naming... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 150 232
IPR009009 RlpA-like_DPBB 58 136
No external refs found!