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  5. Brara.G00049.1

Brara.G00049.1


Description : class XI myosin microfilament-based motor protein


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00049.1
Cluster HCAA Clusters: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G302553 No alias myosin XI B 0.02 Orthogroups_2024-Update
Glyma.08G161500 No alias Myosin family protein with Dil domain 0.03 Orthogroups_2024-Update
Glyma.13G281900 No alias myosin 2 0.02 Orthogroups_2024-Update
Sobic.009G212900.1 No alias class XI myosin microfilament-based motor protein 0.03 Orthogroups_2024-Update
Solyc09g091080 No alias myosin XI A (AHRD V3.3 *** AT1G04600.1) 0.03 Orthogroups_2024-Update
evm.model.tig00000056.26 No alias (at2g20290 : 520.0) member of Myosin-like proteins;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016459 myosin complex IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1308 1411
IPR004009 Myosin_N 12 49
IPR001609 Myosin_head_motor_dom 64 718
IPR000048 IQ_motif_EF-hand-BS 845 864
IPR000048 IQ_motif_EF-hand-BS 779 797
IPR000048 IQ_motif_EF-hand-BS 753 771
No external refs found!