1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G00162.1

Brara.G00162.1


Description : E3 ubiquitin protein ligase *(PUB34) & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0000143 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00162.1
Cluster HCAA Clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
A4A49_12881 No alias u-box domain-containing protein 34 0.06 Orthogroups_2024-Update
Brara.D02773.1 No alias E3 ubiquitin protein ligase *(PUB32) & EC_2.7... 0.02 Orthogroups_2024-Update
Brara.I00665.1 No alias E3 ubiquitin protein ligase *(PUB51) & EC_2.7... 0.03 Orthogroups_2024-Update
Brara.J01128.1 No alias E3 ubiquitin protein ligase *(PUB34) & EC_2.7... 0.04 Orthogroups_2024-Update
Glyma.08G027500 No alias Protein kinase protein with adenine nucleotide alpha... 0.04 Orthogroups_2024-Update
Glyma.14G107600 No alias protein kinase family protein 0.04 Orthogroups_2024-Update
LOC_Os06g37620 No alias protein kinase family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g41220 No alias protein kinase family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G279500 No alias Protein kinase protein with adenine nucleotide alpha... 0.02 Orthogroups_2024-Update
Seita.4G029300.1 No alias E3 ubiquitin protein ligase *(PUB51) & E3 ubiquitin... 0.02 Orthogroups_2024-Update
Sobic.001G306101.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G197500.1 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 Orthogroups_2024-Update
Sopen03g004290 No alias Protein tyrosine kinase 0.04 Orthogroups_2024-Update
Sopen06g022280 No alias Protein kinase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA 16Dec
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
BP GO:0006468 protein phosphorylation IEA 16Dec
BP GO:0016567 protein ubiquitination IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 749 815
IPR006016 UspA 44 157
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 468 722
No external refs found!