1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G00260.1

Brara.G00260.1


Description : Unknown function


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00260.1
Cluster HCAA Clusters: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G239400 No alias acyl activating enzyme 5 0.03 Orthogroups_2024-Update
Potri.007G059300 No alias acyl activating enzyme 1 0.03 Orthogroups_2024-Update
Seita.9G431700.1 No alias peroxisomal acetyl-CoA synthetase *(ACN/BZU) 0.04 Orthogroups_2024-Update
Solyc06g008920 No alias AMP dependent ligase, putative (AHRD V3.3 *** B9R8M5_RICCO) 0.03 Orthogroups_2024-Update
Solyc07g043640 No alias AMP-dependent synthetase and ligase family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 66 497
IPR025110 AMP-bd_C 506 581
No external refs found!