1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G00267.1

Brara.G00267.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00267.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
A4A49_19370 No alias ring-h2 finger protein atl70 0.11 Orthogroups_2024-Update
At1g76410 No alias ATL8 [Source:UniProtKB/TrEMBL;Acc:A0A178WF21] 0.03 Orthogroups_2024-Update
At2g17450 No alias Probable E3 ubiquitin-protein ligase ATL44... 0.03 Orthogroups_2024-Update
At3g10910 No alias RING-H2 finger protein ATL72... 0.02 Orthogroups_2024-Update
Bradi5g09830 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G038880.1 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU4Hr1G004390.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU7Hr1G107430.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
HORVU7Hr1G120930.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G042500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.5G149000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G184500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.006G193000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.010G158766.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g010330 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g066510 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) 0.03 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen12g024180 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 146
No external refs found!