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  5. Brara.G00285.1

Brara.G00285.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00285.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g09550 No alias Pectin acetylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I107] 0.06 Orthogroups_2024-Update
Bradi2g12047 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Bradi2g12057 No alias Pectinacetylesterase family protein 0.04 Orthogroups_2024-Update
Brara.I01620.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
GRMZM2G117999 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
GRMZM2G156365 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
GRMZM2G329002 No alias Pectinacetylesterase family protein 0.02 Orthogroups_2024-Update
Glyma.16G075800 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
LOC_Os10g40290 No alias pectinacetylesterase domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.1G287600.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Sobic.003G150700.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Sobic.003G384700.3 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 49 397
No external refs found!