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  5. Brara.G00409.1

Brara.G00409.1


Description : homologous recombination repair exonuclease *(EXO1)


Gene families : OG_42_0003740 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003740_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00409.1
Cluster HCAA Clusters: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G163700 No alias 5\'-3\' exonuclease family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G076270.15 No alias homologous recombination repair exonuclease *(EXO1) 0.03 Orthogroups_2024-Update
PSME_00044153-RA No alias (at1g18090 : 150.0) 5'-3' exonuclease family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 141 226
IPR006085 XPG_DNA_repair_N 1 98
No external refs found!