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  5. Brara.G00416.1

Brara.G00416.1


Description : Unknown function


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00416.1
Cluster HCAA Clusters: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
At1g45616 No alias Receptor-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C637] 0.03 Orthogroups_2024-Update
Brara.A02063.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
LOC_Os04g28210 No alias verticillium wilt disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G128400 No alias receptor like protein 6 0.04 Orthogroups_2024-Update
Sobic.008G075700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g005780 No alias No description available 0.02 Orthogroups_2024-Update
Solyc01g014160 No alias No description available 0.03 Orthogroups_2024-Update
Sopen06g003150 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update
Sopen12g001990 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 181 203
IPR001611 Leu-rich_rpt 109 168
IPR001611 Leu-rich_rpt 406 465
IPR001611 Leu-rich_rpt 571 629
IPR013210 LRR_N_plant-typ 31 78
No external refs found!