1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G00534.1

Brara.G00534.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00534.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At1g66760 No alias Protein DETOXIFICATION 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M8] 0.06 Orthogroups_2024-Update
Bradi2g16223 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Brara.C04003.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.G00427.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Brara.G03247.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Glyma.07G100100 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.13G275400 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Kfl00258_0100 kfl00258_0100_v1.1 (at5g52450 : 338.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
PSME_00033458-RA No alias (at5g52450 : 300.0) MATE efflux family protein;... 0.04 Orthogroups_2024-Update
PSME_00034046-RA No alias (at5g52450 : 344.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Seita.9G275600.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Sobic.002G006500.3 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sobic.010G256700.4 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Solyc03g034400 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BFW0_SOLLC) 0.02 Orthogroups_2024-Update
Solyc03g112250 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BK79_SOLLC) 0.03 Orthogroups_2024-Update
Solyc05g008510 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BX25_SOLLC) 0.03 Orthogroups_2024-Update
Sopen02g035720 No alias MatE 0.02 Orthogroups_2024-Update
Sopen03g007250 No alias MatE 0.02 Orthogroups_2024-Update
Sopen03g037890 No alias MatE 0.02 Orthogroups_2024-Update
Sopen03g037900 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 248 399
IPR002528 MATE_fam 16 175
No external refs found!