1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G00677.1

Brara.G00677.1


Description : mRNA endoribonuclease *(G3BP)


Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00677.1
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 307 363
IPR002075 NTF2 15 131
No external refs found!