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  5. Brara.G00686.1

Brara.G00686.1


Description : Unknown function


Gene families : OG_42_0002935 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00686.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
439924 No alias Zinc finger (CCCH-type) family protein / RNA recognition... 0.02 Orthogroups_2024-Update
Glyma.14G015700 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.03 Orthogroups_2024-Update
Solyc07g065290 No alias Zinc finger transcription factor 51 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 327 375
IPR025605 OST-HTH/LOTUS_dom 210 289
No external refs found!