Brara.G00808.1

Description : subgroup ERF-VIII transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G00808.1
Cluster	HCAA Clusters: Cluster_260

Target	Alias	Description	ECC score	Gene Family Method
68470	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
AC206951.3_FG016	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
At4g25490	No alias	DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3]	0.03	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi4g41616	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00844.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Brara.C01453.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.04	Orthogroups_2024-Update
Brara.E00692.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Brara.F00133.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.H01496.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.H02264.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.I01985.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G003466	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G103085	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.04	Orthogroups_2024-Update
GRMZM2G138396	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
GRMZM2G149756	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G466044	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
GRMZM2G481668	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Glyma.01G232000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.02G236800	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.03G112000	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G301300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.04	Orthogroups_2024-Update
Glyma.13G122600	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Glyma.13G216900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.16G047600	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.17G169800	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.20G070000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU4Hr1G015350.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
LOC_Os04g55520	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g37640	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os06g09390	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g31580	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_13408g0010	No alias	(at1g21910 : 95.9) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_329325g0010	No alias	(at4g17500 : 94.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00004891-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00005186-RA	No alias	(at4g17500 : 141.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00008891-RA	No alias	(at4g17500 : 93.6) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
Potri.001G079800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.04	Orthogroups_2024-Update
Potri.002G094200	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.003G150700	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Potri.005G223200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.03	Orthogroups_2024-Update
Potri.012G134100	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Potri.014G046700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.014G046800	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.019G036100	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s221_67V6	No alias	ap2 erebp transcription factor	0.02	Orthogroups_2024-Update
Seita.1G188000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.5G115000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Seita.9G320700.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G100500.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G058732.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G168200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.05	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc02g077370	No alias	Ethylene Response Factor C.5	0.03	Orthogroups_2024-Update
Solyc03g006320	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.04	Orthogroups_2024-Update
Solyc06g065820	No alias	Ethylene Response Factor H.1	0.03	Orthogroups_2024-Update
Solyc10g080310	No alias	Dehydration responsive element binding transcription...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	Predicted GO
BP	GO:0000966	RNA 5'-end processing	IEP	Predicted GO
BP	GO:0001682	tRNA 5'-leader removal	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
BP	GO:0016197	endosomal transport	IEP	Predicted GO
CC	GO:0030677	ribonuclease P complex	IEP	Predicted GO
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Predicted GO
BP	GO:0034471	ncRNA 5'-end processing	IEP	Predicted GO
CC	GO:0036452	ESCRT complex	IEP	Predicted GO
CC	GO:0044433	cytoplasmic vesicle part	IEP	Predicted GO
CC	GO:0044440	endosomal part	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
BP	GO:0071985	multivesicular body sorting pathway	IEP	Predicted GO
BP	GO:0099116	tRNA 5'-end processing	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO
CC	GO:1902555	endoribonuclease complex	IEP	Predicted GO
CC	GO:1905348	endonuclease complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	11	60

External Links

No external refs found!

Brara.G00808.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation