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  5. Brara.G00892.1

Brara.G00892.1


Description : MYB class-R2R3 subgroup-19/20 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00892.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AC206901.3_FG005 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
At5g59780 No alias Transcription factor MYB59... 0.03 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Brara.B03738.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.04 Orthogroups_2024-Update
Brara.J01347.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G095904 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
GRMZM2G096358 No alias myb domain protein 62 0.04 Orthogroups_2024-Update
Glyma.03G183900 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.07G038000 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.05 Orthogroups_2024-Update
Glyma.18G095600 No alias myb domain protein 101 0.06 Orthogroups_2024-Update
Glyma.18G259100 No alias myb domain protein 30 0.04 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU6Hr1G067380.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g43680 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_139238g0010 No alias (at1g09540 : 266.0) Encodes putative transcription... 0.02 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00022392-RA No alias (at3g13540 : 238.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00023605-RA No alias (p20026|myb1_horvu : 272.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
PSME_00036271-RA No alias (at5g57620 : 240.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00050636-RA No alias (p20025|myb38_maize : 262.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
PSME_00052620-RA No alias (at3g13540 : 220.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
Solyc04g014470 No alias R2R3MYB transcription factor 20 0.03 Orthogroups_2024-Update
Sopen01g004560 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 73 116
IPR001005 SANT/Myb 20 67
No external refs found!