Brara.G00930.1


Description : E3 ubiquitin ligase *(SNIPER)


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00930.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.03 Orthogroups_2024-Update
A4A49_41691 No alias e3 ubiquitin-protein ligase sdir1 0.04 Orthogroups_2024-Update
At1g14200 No alias At1g14200 [Source:UniProtKB/TrEMBL;Acc:Q9XI67] 0.04 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Brara.C00961.1 No alias signal transducer of abscisic acid perception *(AIP2) 0.03 Orthogroups_2024-Update
Brara.I04047.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.04G251600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G017500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G089800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G105900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G108900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os11g04281 No alias zinc finger, C3HC4 type domain containing protein 0.03 Orthogroups_2024-Update
LOC_Os12g02620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g04660 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_19897g0010 No alias (at3g56580 : 190.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_219769g0010 No alias (at5g20910 : 155.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_474338g0010 No alias (at2g39720 : 83.2) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
MA_61067g0010 No alias (at5g08139 : 94.4) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_816375g0010 No alias (at2g40830 : 158.0) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
MA_9328282g0010 No alias (at5g01980 : 161.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00056956-RA No alias (at2g40830 : 186.0) Encodes a putative RING-H2 finger... 0.06 Orthogroups_2024-Update
Potri.005G062400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G032100 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Potri.007G084600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G029300 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Potri.019G086500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G208100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G031500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G317600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G172800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G386000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G055501.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G152101.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G028900.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g082890 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen03g029300 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen08g021220 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen12g003430 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 111 153
No external refs found!