Description : E3 ubiquitin ligase *(SNIPER)
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.G00930.1 | |
Cluster | HCAA Clusters: Cluster_31 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_41488 | No alias | e3 ubiquitin-protein ligase rduf1 | 0.03 | Orthogroups_2024-Update | |
A4A49_41691 | No alias | e3 ubiquitin-protein ligase sdir1 | 0.04 | Orthogroups_2024-Update | |
At1g14200 | No alias | At1g14200 [Source:UniProtKB/TrEMBL;Acc:Q9XI67] | 0.04 | Orthogroups_2024-Update | |
At3g13228 | No alias | RING/U-box superfamily protein... | 0.03 | Orthogroups_2024-Update | |
At3g60080 | No alias | At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] | 0.03 | Orthogroups_2024-Update | |
Brara.C00961.1 | No alias | signal transducer of abscisic acid perception *(AIP2) | 0.03 | Orthogroups_2024-Update | |
Brara.I04047.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Cre10.g422050 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
Glyma.04G251600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.05G017500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G089800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.14G105900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.17G108900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g04281 | No alias | zinc finger, C3HC4 type domain containing protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os12g02620 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os12g04660 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
MA_19897g0010 | No alias | (at3g56580 : 190.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_219769g0010 | No alias | (at5g20910 : 155.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_474338g0010 | No alias | (at2g39720 : 83.2) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
MA_61067g0010 | No alias | (at5g08139 : 94.4) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_816375g0010 | No alias | (at2g40830 : 158.0) Encodes a putative RING-H2 finger... | 0.02 | Orthogroups_2024-Update | |
MA_9328282g0010 | No alias | (at5g01980 : 161.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00056956-RA | No alias | (at2g40830 : 186.0) Encodes a putative RING-H2 finger... | 0.06 | Orthogroups_2024-Update | |
Potri.005G062400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.006G032100 | No alias | RING-H2 finger C1A | 0.03 | Orthogroups_2024-Update | |
Potri.007G084600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.016G029300 | No alias | RING-H2 finger C1A | 0.03 | Orthogroups_2024-Update | |
Potri.019G086500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.2G181600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.4G208100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.6G031500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G317600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.8G172700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.8G172800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G386000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.005G055501.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.005G165900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.007G152101.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.008G028900.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc02g082890 | No alias | LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen03g029300 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen08g021220 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen12g003430 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0015267 | channel activity | IEP | Predicted GO |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 111 | 153 |
No external refs found! |