Brara.G01019.1

Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01019.1
Cluster	HCAA Clusters: Cluster_207

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.03	Orthogroups_2024-Update
A4A49_16905	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_23921	No alias	ethylene-responsive transcription factor erf034	0.05	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.06	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.D00278.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.D01886.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Brara.G02253.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.H00929.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Brara.H02380.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.I04175.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G039112	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
GRMZM2G055204	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Glyma.05G179900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G004200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.16G164800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.20G203500	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
LOC_Os07g42510	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_12547g0010	No alias	(at5g25810 : 85.9) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_426919g0020	No alias	(at1g19210 : 104.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_502153g0010	No alias	(at5g44210 : 94.4) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00008862-RA	No alias	(q6k7e6\|erf1_orysa : 93.6) Ethylene-responsive...	0.02	Orthogroups_2024-Update
Potri.005G168700	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.006G138900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G046500	No alias	DREB and EAR motif protein 2	0.05	Orthogroups_2024-Update
Potri.007G138100	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.013G056700	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s259_94V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_3V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s335_8V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.03	Orthogroups_2024-Update
Seita.1G323500.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.8G237900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.006G170100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Solyc03g005520	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g050830	No alias	Ethylene-responsive transcription factor4	0.03	Orthogroups_2024-Update
Solyc06g082590	No alias	DNA-binding protein Pti6	0.04	Orthogroups_2024-Update
Solyc08g066660	No alias	Ethylene-responsive transcription factor TINY (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc08g080290	No alias	Dehydration responsive element binding transcription...	0.03	Orthogroups_2024-Update
Solyc09g089930	No alias	ethylene responsive factor E.2	0.03	Orthogroups_2024-Update
Solyc10g006130	No alias	EAR motif SlERF36	0.03	Orthogroups_2024-Update
Solyc10g076380	No alias	Dehydration responsive element binding transcription...	0.02	Orthogroups_2024-Update
Solyc12g008350	No alias	dehydration responsive element binding protein 2	0.03	Orthogroups_2024-Update
Sopen07g024840	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g028150	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g033090	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen10g004900	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	68	125

External Links

No external refs found!

Brara.G01019.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation