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  5. Brara.G01098.1

Brara.G01098.1


Description : OPC-8


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01098.1
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.03 Orthogroups_2024-Update
Bradi1g31320 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Brara.F01459.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Brara.H02327.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Glyma.10G197900 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
Glyma.11G010500 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G018190.6 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G111130.3 No alias p-coumarate 0.03 Orthogroups_2024-Update
MA_14460g0010 No alias (at1g20510 : 613.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.05 Orthogroups_2024-Update
Mp5g07170.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.008G031500 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Potri.012G094800 No alias AMP-dependent synthetase and ligase family protein 0.04 Orthogroups_2024-Update
Pp1s20_346V6 No alias 4-coumarate: ligase 0.02 Orthogroups_2024-Update
Seita.7G048000.1 No alias acyl-CoA synthetase *(ACS5) 0.04 Orthogroups_2024-Update
Seita.9G184100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 43 444
IPR025110 AMP-bd_C 453 528
No external refs found!