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  5. Brara.G01131.1

Brara.G01131.1


Description : Unknown function


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01131.1
Cluster HCAA Clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
144066 No alias glycosyl hydrolase 9B7 0.02 Orthogroups_2024-Update
At1g23210 No alias Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296] 0.03 Orthogroups_2024-Update
Brara.E01094.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G455642 No alias glycosyl hydrolase 9B1 0.04 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.02 Orthogroups_2024-Update
LOC_Os02g50040 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g13830 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00006286-RA No alias (at4g11050 : 506.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
PSME_00008280-RA No alias (at1g02800 : 594.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
Potri.003G139600 No alias glycosyl hydrolase 9C2 0.03 Orthogroups_2024-Update
Potri.014G157600 No alias glycosyl hydrolase 9B8 0.02 Orthogroups_2024-Update
Seita.3G076100.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Seita.5G019600.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Solyc04g081300 No alias Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 66 519
No external refs found!