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  5. Brara.G01177.1

Brara.G01177.1


Description : MYB class-R2R3 subgroup-22/23 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01177.1
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
A4A49_10535 No alias myb-related protein 3r-1 0.03 Orthogroups_2024-Update
A4A49_36591 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
Bradi2g28910 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Brara.G02889.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G531738 No alias Homeodomain-like protein 0.03 Orthogroups_2024-Update
Glyma.02G253100 No alias myb domain protein 109 0.03 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.14G192600 No alias myb domain protein 64 0.03 Orthogroups_2024-Update
Glyma.19G062000 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.19G085700 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
HORVU4Hr1G017040.2 No alias MYB class-R2R3 subgroup-21 transcription factor 0.04 Orthogroups_2024-Update
LOC_Os05g38460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g43090 No alias MYB transcription factor TaMYB1, putative, expressed 0.02 Orthogroups_2024-Update
MA_10425867g0020 No alias (at1g69560 : 184.0) Encodes LOF2 (LATERAL ORGAN... 0.03 Orthogroups_2024-Update
MA_4704g0010 No alias (at1g26780 : 223.0) Encodes LOF1 (LATERAL ORGAN... 0.03 Orthogroups_2024-Update
PSME_00025751-RA No alias (at3g50060 : 193.0) Encodes a member of the R2R3... 0.03 Orthogroups_2024-Update
Pp1s10_267V6 No alias r2r3-myb transcription factor 0.02 Orthogroups_2024-Update
Seita.4G205800.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G054400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G352200.1 No alias R1R2R3-MYB transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
Solyc04g078420 No alias R2R3MYB transcription factor 70 0.03 Orthogroups_2024-Update
Sopen05g031360 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 6 52
IPR001005 SANT/Myb 60 102
No external refs found!