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  5. Brara.G01244.1

Brara.G01244.1


Description : ubiquitin-dependent protease *(DA1)


Gene families : OG_42_0000650 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01244.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_11192 No alias protein da1-related 2 0.03 Orthogroups_2024-Update
Bradi5g01160 No alias DA1 0.03 Orthogroups_2024-Update
GRMZM2G099328 No alias LIM domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.01G179800 No alias LIM domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.16G142700 No alias LIM domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.18G034100 No alias DA1-related protein 2 0.03 Orthogroups_2024-Update
LOC_Os03g16090 No alias LIM domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g42820 No alias LIM domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00000765-RA No alias (at1g19270 : 206.0) DA1 (DA1); CONTAINS InterPro... 0.03 Orthogroups_2024-Update
PSME_00032792-RA No alias (at1g19270 : 176.0) DA1 (DA1); CONTAINS InterPro... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
InterPro domains Description Start Stop
IPR001781 Znf_LIM 341 379
IPR022087 DA1-like 484 705
No external refs found!