1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G01290.1

Brara.G01290.1


Description : Unknown function


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01290.1
Cluster HCAA Clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
A4A49_12201 No alias zinc finger protein zat5 0.03 Orthogroups_2024-Update
A4A49_15164 No alias zinc finger protein zat5 0.05 Orthogroups_2024-Update
A4A49_29565 No alias zinc finger protein zat5 0.03 Orthogroups_2024-Update
A4A49_32244 No alias zinc finger protein zat11 0.03 Orthogroups_2024-Update
A4A49_40512 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
At4g35700 No alias At4g35700 [Source:UniProtKB/TrEMBL;Acc:O81801] 0.03 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Glyma.10G257900 No alias zinc-finger protein 1 0.03 Orthogroups_2024-Update
Glyma.11G084900 No alias zinc finger (C2H2 type) family protein 0.04 Orthogroups_2024-Update
Glyma.20G133200 No alias salt tolerance zinc finger 0.04 Orthogroups_2024-Update
HORVU5Hr1G113070.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g57790 No alias ZOS2-19 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_101494g0010 No alias (at1g02040 : 99.8) C2H2-type zinc finger family protein;... 0.03 Orthogroups_2024-Update
MA_10428436g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.004G216900 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Seita.9G034100.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!