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  5. Brara.G01353.1

Brara.G01353.1


Description : transcriptional regulator *(FIT) of iron homeostasis & bHLH-type transcription factor


Gene families : OG_42_0000609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01353.1
Cluster HCAA Clusters: Cluster_391

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G119823 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G101100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
HORVU2Hr1G066090.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g23550 No alias basic helix-loop-helix family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433418g0010 No alias (at1g12860 : 83.2) Encodes ICE2 (Inducer of CBF... 0.04 Orthogroups_2024-Update
PSME_00014660-RA No alias (at2g16910 : 101.0) Encodes a basic helix-loop helix... 0.03 Orthogroups_2024-Update
PSME_00042827-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00047880-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00048166-RA No alias (at2g16910 : 116.0) Encodes a basic helix-loop helix... 0.03 Orthogroups_2024-Update
PSME_00053451-RA No alias (at2g16910 : 116.0) Encodes a basic helix-loop helix... 0.03 Orthogroups_2024-Update
Potri.T155900 No alias FER-like regulator of iron uptake 0.03 Orthogroups_2024-Update
Seita.7G045100.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G045200.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G051800.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 130 175
No external refs found!