Brara.G01355.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01355.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_10804 No alias zinc finger protein zat11 0.04 Orthogroups_2024-Update
A4A49_40512 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
A4A49_41461 No alias zinc finger protein zat10 0.04 Orthogroups_2024-Update
At2g28200 No alias Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4] 0.05 Orthogroups_2024-Update
At3g19580 No alias ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97] 0.03 Orthogroups_2024-Update
Brara.C01069.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.C03744.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G002805 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
GRMZM2G035103 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G081400 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.12G178900 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G000380.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G057300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G113090.1 No alias C2H2-type subclass ZAT transcription factor 0.01 Orthogroups_2024-Update
HORVU5Hr1G113100.1 No alias C2H2-type subclass ZAT transcription factor 0.01 Orthogroups_2024-Update
LOC_Os02g57790 No alias ZOS2-19 - C2H2 zinc finger protein, expressed 0.06 Orthogroups_2024-Update
LOC_Os12g39400 No alias ZOS12-09 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_10428436g0020 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_109421g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_23050g0010 No alias (at2g45120 : 95.1) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
PSME_00015139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.03 Orthogroups_2024-Update
Potri.004G216900 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Seita.1G372800.1 No alias C2H2-type subclass ZAT transcription factor 0.06 Orthogroups_2024-Update
Sobic.001G035100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G351700.1 No alias C2H2-type subclass ZAT transcription factor 0.05 Orthogroups_2024-Update
Sobic.008G144500.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Solyc06g074800 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen06g031240 No alias C2H2-type zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!