Brara.G01368.1

Description : transcription factor *(A/B-GATA)

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01368.1
Cluster	HCAA Clusters: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15410	No alias	gata transcription factor 12	0.01	Orthogroups_2024-Update
A4A49_15701	No alias	gata transcription factor 1	0.04	Orthogroups_2024-Update
Bradi1g78540	No alias	GATA transcription factor 2	0.01	Orthogroups_2024-Update
Brara.C01244.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
Glyma.08G187300	No alias	GATA transcription factor 29	0.01	Orthogroups_2024-Update
Glyma.10G210500	No alias	GATA transcription factor 9	0.02	Orthogroups_2024-Update
Glyma.13G325100	No alias	GATA transcription factor 11	0.02	Orthogroups_2024-Update
Glyma.16G155300	No alias	GATA transcription factor 4	0.04	Orthogroups_2024-Update
Glyma.17G055200	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.19G229900	No alias	GATA transcription factor 16	0.08	Orthogroups_2024-Update
HORVU5Hr1G116310.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
LOC_Os02g56250	No alias	GATA zinc finger domain containing protein, expressed	0.01	Orthogroups_2024-Update
PSME_00050219-RA	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
PSME_00051947-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Sobic.009G050600.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Solyc01g110310	No alias	GATA transcription factor (AHRD V3.3 *** K4B3P4_SOLLC)	0.01	Orthogroups_2024-Update
Sopen01g052460	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	224	258

External Links

No external refs found!

Brara.G01368.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation