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  5. Brara.G01400.1

Brara.G01400.1


Description : UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0000621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01400.1
Cluster HCAA Clusters: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
438351 No alias UDP-XYL synthase 5 0.02 Orthogroups_2024-Update
Bradi1g18020 No alias UDP-xylose synthase 4 0.03 Orthogroups_2024-Update
Glyma.11G141300 No alias UDP-XYL synthase 5 0.04 Orthogroups_2024-Update
Glyma.17G027300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
PSME_00008303-RA No alias (at3g62830 : 299.0) encodes an isoform of UDP-glucuronic... 0.02 Orthogroups_2024-Update
Potri.001G237200 No alias UDP-XYL synthase 5 0.06 Orthogroups_2024-Update
Potri.010G207200 No alias UDP-XYL synthase 6 0.03 Orthogroups_2024-Update
Solyc05g054590 No alias UDP-glucuronate decarboxylase 1 (AHRD V3.3 *** Q6IVK5_TOBAC) 0.04 Orthogroups_2024-Update
Solyc11g066150 No alias UDP-glucuronate decarboxylase 1 (AHRD V3.3 *** Q6IVK5_TOBAC) 0.06 Orthogroups_2024-Update
Sopen05g033070 No alias NAD dependent epimerase/dehydratase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 30 324
No external refs found!