Brara.G01420.1

Description : E3 ubiquitin ligase *(SINA)

Gene families : OG_42_0000590 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000590_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01420.1
Cluster	HCAA Clusters: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
At1g66660	No alias	E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:F4IEX9]	0.03	Orthogroups_2024-Update
At5g37870	No alias	Putative E3 ubiquitin-protein ligase SINA-like 6...	0.03	Orthogroups_2024-Update
At5g37900	No alias	TRAF-like superfamily protein [Source:TAIR;Acc:AT5G37900]	0.03	Orthogroups_2024-Update
HORVU1Hr1G012490.5	No alias	E3 ubiquitin ligase *(SINA)	0.03	Orthogroups_2024-Update
Seita.5G084100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	16Dec
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015689	molybdate ion transport	IEP	Predicted GO
BP	GO:0015698	inorganic anion transport	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
BP	GO:0040008	regulation of growth	IEP	Predicted GO
BP	GO:0045927	positive regulation of growth	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	135	244

External Links

No external refs found!

Brara.G01420.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation