Brara.G01422.1

Description : E3 ubiquitin ligase

Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01422.1
Cluster	HCAA Clusters: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.20G124800	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000731	DNA synthesis involved in DNA repair	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0071897	DNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	91	196
IPR011016	Znf_RING-CH	40	85

External Links

No external refs found!