Brara.G01463.1

Description : scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes

Gene families : OG_42_0000877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01463.1
Cluster	HCAA Clusters: Cluster_397

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32093	No alias	cullin-1	0.04	Orthogroups_2024-Update
A4A49_32587	No alias	cullin-1	0.03	Orthogroups_2024-Update
At1g02980	No alias	Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]	0.03	Orthogroups_2024-Update
At1g59790	No alias	Putative cullin-like protein 2...	0.04	Orthogroups_2024-Update
Brara.J00148.1	No alias	scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes	0.04	Orthogroups_2024-Update
PSME_00054370-RA	No alias	(at4g02570 : 594.0) Encodes a cullin that is a component...	0.02	Orthogroups_2024-Update
Potri.010G023800	No alias	cullin 1	0.03	Orthogroups_2024-Update
Seita.5G167900.1	No alias	scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes	0.03	Orthogroups_2024-Update
Solyc09g010050	No alias	cullin 1 (AHRD V3.3 *** AT4G02570.4)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	16Dec
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
BP	GO:0008285	negative regulation of cell proliferation	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0042127	regulation of cell proliferation	IEP	Predicted GO
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
BP	GO:0048519	negative regulation of biological process	IEP	Predicted GO
BP	GO:0048523	negative regulation of cellular process	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR019559	Cullin_neddylation_domain	633	694
IPR001373	Cullin_N	21	606

External Links

No external refs found!