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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000883 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000883_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.G01474.1 | |
| Cluster | HCAA Clusters: Cluster_117 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At5g40250 | No alias | RING-H2 finger protein ATL46... | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G016362 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G122284 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G416216 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G055750.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| PSME_00034279-RA | No alias | (at4g30400 : 237.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Potri.017G072350 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0004564 | beta-fructofuranosidase activity | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| BP | GO:0006012 | galactose metabolic process | IEP | Predicted GO |
| BP | GO:0006534 | cysteine metabolic process | IEP | Predicted GO |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predicted GO |
| BP | GO:0006563 | L-serine metabolic process | IEP | Predicted GO |
| MF | GO:0008108 | UDP-glucose:hexose-1-phosphate uridylyltransferase activity | IEP | Predicted GO |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Predicted GO |
| CC | GO:0031082 | BLOC complex | IEP | Predicted GO |
| CC | GO:0031083 | BLOC-1 complex | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| CC | GO:0044445 | cytosolic part | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 116 | 159 |
| No external refs found! |