Brara.G01602.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01602.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
At1g27730 No alias Zinc finger protein ZAT10... 0.03 Orthogroups_2024-Update
At1g49900 No alias C2H2 type zinc finger transcription factor family... 0.04 Orthogroups_2024-Update
At2g26940 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
At5g56200 No alias C2H2 type zinc finger transcription factor family... 0.03 Orthogroups_2024-Update
At5g59820 No alias Zinc finger protein ZAT12... 0.04 Orthogroups_2024-Update
Brara.B01283.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.03G186100 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.10G045200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G045400 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.10G059700 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.11G142500 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.19G174000 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g57790 No alias ZOS2-19 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.02 Orthogroups_2024-Update
Potri.001G224600 No alias C2H2 type zinc finger transcription factor family 0.03 Orthogroups_2024-Update
Potri.001G235800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G205300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.007G062000 No alias zinc finger (C2H2 type) family protein 0.04 Orthogroups_2024-Update
Seita.1G261200.1 No alias C2H2-type subclass ZAT transcription factor & C2H2-type... 0.04 Orthogroups_2024-Update
Seita.2G374300.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.7G018900.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.9G357400.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G079500.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G333700.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Solyc06g060480 No alias Zinc finger family protein (AHRD V3.3 *** B9HPY6_POPTR) 0.03 Orthogroups_2024-Update
Solyc06g075780 No alias Zinc finger, C2H2 (AHRD V3.3 *** A0A103Y6U7_CYNCS) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!