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  5. Brara.G01663.1

Brara.G01663.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01663.1
Cluster HCAA Clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Bradi1g57082 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.02 Orthogroups_2024-Update
Brara.F01260.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G019500 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.04 Orthogroups_2024-Update
Glyma.08G204700 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.03 Orthogroups_2024-Update
HORVU2Hr1G095210.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G062510.2 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
HORVU7Hr1G073450.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Potri.002G154700 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Potri.T120700 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Pp1s173_90V6 No alias No description available 0.02 Orthogroups_2024-Update
Solyc09g060170 No alias LOW QUALITY:Homeobox leucine zipper protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 227 434
IPR001356 Homeobox_dom 25 79
No external refs found!