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  5. Brara.G01708.1

Brara.G01708.1


Description : calcium sensor *(CML) & calcium sensor *(CaM)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01708.1
Cluster HCAA Clusters: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Brara.G02648.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
GRMZM2G067511 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Potri.013G040300 No alias calmodulin-like 11 0.04 Orthogroups_2024-Update
Potri.016G024700 No alias calmodulin 5 0.03 Orthogroups_2024-Update
Seita.9G097000.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Solyc01g105630 No alias Calmodulin, putative (AHRD V3.3 *** B9S4P7_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 73
IPR002048 EF_hand_dom 83 146
No external refs found!