Description : MADS/AGL-type transcription factor
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.G01735.1 | |
Cluster | HCAA Clusters: Cluster_225 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
437868 | No alias | AGAMOUS-like 29 | 0.03 | Orthogroups_2024-Update | |
A4A49_39464 | No alias | agamous-like mads-box protein agl8 | 0.03 | Orthogroups_2024-Update | |
At4g22950 | No alias | Agamous-like MADS-box protein AGL19... | 0.03 | Orthogroups_2024-Update | |
Bradi1g39927 | No alias | AGAMOUS-like 23 | 0.02 | Orthogroups_2024-Update | |
Bradi5g21700 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Brara.I02103.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.03 | Orthogroups_2024-Update | |
Brara.I03027.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.05 | Orthogroups_2024-Update | |
Brara.K00360.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
GRMZM5G878490 | No alias | AGAMOUS-like 62 | 0.04 | Orthogroups_2024-Update | |
Glyma.05G163200 | No alias | K-box region and MADS-box transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.17G081200 | No alias | AGAMOUS-like 8 | 0.06 | Orthogroups_2024-Update | |
LOC_Os02g07430 | No alias | OsMADS29 - MADS-box family gene with MIKCc type-box, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g23910 | No alias | OsMADS25 - MADS-box family gene with MIKCc type-box, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g01890 | No alias | MADS-box transcription factor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_333471g0010 | No alias | (at2g45660 : 106.0) Controls flowering and is required... | 0.05 | Orthogroups_2024-Update | |
Pp1s209_130V6 | No alias | mads-box transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.2G002300.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.03 | Orthogroups_2024-Update | |
Seita.3G280400.1 | No alias | MADS/AGL-type transcription factor | 0.06 | Orthogroups_2024-Update | |
Sobic.001G314400.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Solyc01g093960 | No alias | MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Sopen01g045900 | No alias | SRF-type transcription factor (DNA-binding and... | 0.03 | Orthogroups_2024-Update | |
Sopen12g029050 | No alias | SRF-type transcription factor (DNA-binding and... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | 16Dec |
CC | GO:0005634 | nucleus | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
MF | GO:0046983 | protein dimerization activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0006534 | cysteine metabolic process | IEP | Predicted GO |
BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predicted GO |
BP | GO:0006563 | L-serine metabolic process | IEP | Predicted GO |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016412 | serine O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0016413 | O-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019344 | cysteine biosynthetic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Predicted GO |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Predicted GO |
MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
No external refs found! |