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  5. Brara.G01778.1

Brara.G01778.1


Description : Unknown function


Gene families : OG_42_0000165 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01778.1
Cluster HCAA Clusters: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
At1g18650 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3... 0.03 Orthogroups_2024-Update
Brara.B03750.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.08G122400 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G028190.2 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00038382-RA No alias (at2g30933 : 121.0) Carbohydrate-binding X8 domain... 0.03 Orthogroups_2024-Update
Potri.012G065750 No alias plasmodesmata callose-binding protein 3 0.03 Orthogroups_2024-Update
Potri.013G119500 No alias plasmodesmata callose-binding protein 5 0.05 Orthogroups_2024-Update
Potri.014G164600 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 Orthogroups_2024-Update
Potri.019G091500 No alias plasmodesmata callose-binding protein 5 0.03 Orthogroups_2024-Update
Seita.2G031600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g005830 No alias Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012946 X8 35 106
No external refs found!