Brara.G01780.1

Description : N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase *(PIG-L)

Gene families : OG_42_0005293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005293_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01780.1
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
At2g27340	No alias	At2g27340 [Source:UniProtKB/TrEMBL;Acc:Q6NLZ3]	0.03	Orthogroups_2024-Update
Brara.I04014.1	No alias	N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase *(PIG-L)	0.04	Orthogroups_2024-Update
LOC_Os04g58210	No alias	N-acetylglucosaminyl-phosphatidylinositol...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
MF	GO:0008373	sialyltransferase activity	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Predicted GO
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predicted GO
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Predicted GO
CC	GO:0120114	Sm-like protein family complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003737	GlcNAc_PI_deacetylase-related	43	166

External Links

No external refs found!