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  5. Brara.G01857.1

Brara.G01857.1


Description : protein factor *(U5-40kDa/snRNP40) of MAC spliceosome-associated complex


Gene families : OG_42_0005247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01857.1
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00021493.8 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 52 132
IPR001680 WD40_repeat 252 293
IPR001680 WD40_repeat 299 332
IPR001680 WD40_repeat 207 243
IPR001680 WD40_repeat 176 201
No external refs found!