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  5. Brara.G01873.1

Brara.G01873.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01873.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
169678 No alias multidrug resistance-associated protein 6 0.02 Orthogroups_2024-Update
230611 No alias multidrug resistance-associated protein 11 0.02 Orthogroups_2024-Update
402326 No alias multidrug resistance-associated protein 5 0.02 Orthogroups_2024-Update
409191 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
99030 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
A4A49_29091 No alias abc transporter c family member 4 0.03 Orthogroups_2024-Update
A4A49_37170 No alias abc transporter c family member 8 0.02 Orthogroups_2024-Update
A4A49_42365 No alias abc transporter c family member 14 0.03 Orthogroups_2024-Update
At3g59140 No alias ABC transporter C family member 10... 0.05 Orthogroups_2024-Update
Bradi1g48670 No alias multidrug resistance-associated protein 14 0.02 Orthogroups_2024-Update
Bradi2g00417 No alias multidrug resistance-associated protein 3 0.02 Orthogroups_2024-Update
Brara.H01890.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.04 Orthogroups_2024-Update
Brara.I02815.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.K00933.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre17.g734612 No alias multidrug resistance-associated protein 2 0.02 Orthogroups_2024-Update
GRMZM2G032218 No alias multidrug resistance-associated protein 9 0.04 Orthogroups_2024-Update
Glyma.07G011500 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
Glyma.10G019000 No alias multidrug resistance-associated protein 4 0.04 Orthogroups_2024-Update
Glyma.10G227400 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
Glyma.20G165000 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
HORVU2Hr1G105510.13 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
LOC_Os06g06440 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g08560 No alias multidrug resistance-associated protein 11, putative, expressed 0.03 Orthogroups_2024-Update
Mp5g02230.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
PSME_00000250-RA No alias (at3g13080 : 737.0) encodes an ATP-dependent MRP-like... 0.03 Orthogroups_2024-Update
PSME_00000251-RA No alias (at3g13090 : 785.0) member of MRP subfamily; multidrug... 0.04 Orthogroups_2024-Update
PSME_00011251-RA No alias (at1g04120 : 1053.0) encodes a high-affinity inositol... 0.03 Orthogroups_2024-Update
PSME_00011253-RA No alias (at1g04120 : 384.0) encodes a high-affinity inositol... 0.02 Orthogroups_2024-Update
PSME_00019176-RA No alias (at3g13080 : 209.0) encodes an ATP-dependent MRP-like... 0.04 Orthogroups_2024-Update
PSME_00020162-RA No alias (at2g47800 : 274.0) Encodes a plasma membrane localized... 0.04 Orthogroups_2024-Update
PSME_00042564-RA No alias (at2g47800 : 256.0) Encodes a plasma membrane localized... 0.04 Orthogroups_2024-Update
PSME_00042896-RA No alias (at3g62700 : 1204.0) member of MRP subfamily; multidrug... 0.03 Orthogroups_2024-Update
PSME_00044356-RA No alias (at3g62700 : 116.0) member of MRP subfamily; multidrug... 0.03 Orthogroups_2024-Update
PSME_00050839-RA No alias (at3g62700 : 174.0) member of MRP subfamily; multidrug... 0.03 Orthogroups_2024-Update
Potri.003G034700 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
Potri.014G180100 No alias multidrug resistance-associated protein 9 0.04 Orthogroups_2024-Update
Potri.015G023800 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
Pp1s293_70V6 No alias multidrug resistance protein abc transporter family 0.03 Orthogroups_2024-Update
Pp1s402_25V6 No alias atp-binding sub-family c (cftr mrp) member 4 0.03 Orthogroups_2024-Update
Seita.4G239600.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Seita.7G216700.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Sobic.003G160200.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Sobic.010G169000.1 No alias subfamily ABCC transporter 0.04 Orthogroups_2024-Update
Solyc11g065720 No alias ABC transporter-like family-protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g030860 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen01g032440 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen03g036450 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen07g033520 No alias ABC transporter 0.04 Orthogroups_2024-Update
Sopen09g025580 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen09g029840 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen11g025460 No alias ABC transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 643 777
IPR011527 ABC1_TM_dom 311 577
IPR011527 ABC1_TM_dom 947 1179
IPR003439 ABC_transporter-like 1269 1417
No external refs found!