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  5. Brara.G01881.1

Brara.G01881.1


Description : Unknown function


Gene families : OG_42_0008898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008898_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01881.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
At3g60380 No alias Cotton fiber protein [Source:UniProtKB/TrEMBL;Acc:Q9M221] 0.03 Orthogroups_2024-Update
Glyma.01G122700 No alias hydroxyproline-rich glycoprotein family protein 0.04 Orthogroups_2024-Update
Glyma.05G062801 No alias hydroxyproline-rich glycoprotein family protein 0.03 Orthogroups_2024-Update
Glyma.17G144800 No alias hydroxyproline-rich glycoprotein family protein 0.04 Orthogroups_2024-Update
Solyc06g060820 No alias 30S ribosomal protein S7, chloroplastic (AHRD V3.3 --* RR7_SAGLA) 0.04 Orthogroups_2024-Update
Sopen08g026790 No alias Cotton fibre expressed protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008480 DUF761_pln 672 695
No external refs found!