Brara.G01933.1

Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.G01933.1
Cluster	HCAA Clusters: Cluster_234

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16120	No alias	ethylene-responsive transcription factor erf061	0.03	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.06	Orthogroups_2024-Update
A4A49_30738	No alias	ethylene-responsive transcription factor abr1	0.02	Orthogroups_2024-Update
At1g19210	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Orthogroups_2024-Update
At1g22985	No alias	CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]	0.04	Orthogroups_2024-Update
At4g18450	No alias	Ethylene-responsive transcription factor ERF091...	0.03	Orthogroups_2024-Update
At4g28140	No alias	Ethylene-responsive transcription factor ERF054...	0.03	Orthogroups_2024-Update
At5g43410	No alias	Ethylene-responsive transcription factor ERF096...	0.02	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi4g41616	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00415.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.C04525.1	No alias	subgroup ERF-III transcription factor	0.05	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Brara.E02695.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.G02224.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.06	Orthogroups_2024-Update
Brara.G03526.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Brara.I04175.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.I05419.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.I05614.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.K00718.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.05	Orthogroups_2024-Update
GRMZM2G003466	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G111415	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.06G111300	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.06G295300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.10G193400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.13G304300	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Glyma.14G084700	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Glyma.15G095600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.17G143900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.17G169800	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.18G262800	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Glyma.18G281400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G142000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G070000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
HORVU0Hr1G036300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU1Hr1G070410.3	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU2Hr1G094780.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU6Hr1G082880.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
HORVU6Hr1G090800.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
LOC_Os01g54890	No alias	ethylene-responsive transcription factor 2, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g42585	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g11860	No alias	ethylene-responsive transcription factor, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os08g07700	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_115348g0020	No alias	(at4g17500 : 116.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
MA_436575g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Mp7g00860.1	No alias	transcription factor (DREB)	0.02	Orthogroups_2024-Update
PSME_00004891-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.07	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.06	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00007285-RA	No alias	(at5g50080 : 84.0) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00008891-RA	No alias	(at4g17500 : 93.6) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00016017-RA	No alias	(at5g25190 : 150.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037532-RA	No alias	(at5g61890 : 129.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00039617-RA	No alias	(at4g17500 : 120.0) Encodes a member of the ERF...	0.05	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.003G054400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G150800	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Potri.006G104200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G043400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Pp1s112_23V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s160_12V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s221_67V6	No alias	ap2 erebp transcription factor	0.02	Orthogroups_2024-Update
Pp1s25_13V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s26_306V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s30_284V6	No alias	ap2 erf domain-containing transcription factor	0.06	Orthogroups_2024-Update
Pp1s340_16V6	No alias	ethylene-responsive transcription	0.03	Orthogroups_2024-Update
Pp1s487_24V6	No alias	ap2 erf domain-containing transcription factor	0.06	Orthogroups_2024-Update
Pp1s53_80V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Seita.1G188000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.2G269600.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.3G139200.1	No alias	subgroup ERF-I transcription factor	0.05	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Seita.4G041600.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.4G092200.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.5G141600.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Seita.6G023800.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.05	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G133566.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.02	Orthogroups_2024-Update
Solyc03g006320	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.03	Orthogroups_2024-Update
Solyc03g123500	No alias	GCC box binding protein C.4	0.03	Orthogroups_2024-Update
Solyc07g049490	No alias	Ethylene Response Factor F.3	0.03	Orthogroups_2024-Update
Solyc10g009110	No alias	ethylene response factor F.5	0.02	Orthogroups_2024-Update
Solyc10g076380	No alias	Dehydration responsive element binding transcription...	0.02	Orthogroups_2024-Update
Sopen03g024350	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen03g024400	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g029570	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen06g018310	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen08g026680	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen12g022660	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	102	152

External Links

No external refs found!

Brara.G01933.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation